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Citrus foot rot, protect your citrus grove from root rot

Citrus foot rot, also called root rot, is severe but it can be treated
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Gum oozing from split bark at the root crown, foliage yellowing and drying in stages, leaves hanging at strange angles, half-grown fruit dropping with a foul smell: these are the late signals of citrus foot rot, the work of Phytophthora. Keep water off the trunk and out of waterlogged soil, and your grove stays clear.

Root rot is definitely a gardener’s worst nightmare – especially when it starts infecting citrus trees.

What causes citrus root rot?

A special micro-organism called Phytophthora is responsible for this disease. When the soil is too wet, it infects roots and they start rotting.

Some experts call it “citrus mildew“, but confusing since another citrus disease caused by Oidium also has the same name.

A big problem with this disease is that symptoms only appear very late:

  • A young sapling, planted with love and care, simply doesn’t seem to want to grow.
  • Worse still, after a few years, it dies off abruptly.
  • No insects, very little visible damage… it just wilted away.

In cases like these, the culprit is Phytophthora, a soil inhabitant. It infects trees, wood plants, and even vegetables. For instance, it also causes tomato blight that doesn’t stop until the entire crop is devastated.

How does this root rot spread?

Citrus tree with bursting bark
The bark splits open and brown wounds form

It’s spread by water, either through contact with the tree’s bark (during heavy rains, for instance), or through fruits (those that are nearer the ground), as rain drops spatter back up. The peel then starts showing signs of damage. There are a great many different types of phytophthora. Some are triggered by warmth, whereas others are more potent when the weather is cool. Most of them appear in spring and in fall.

Soil that stays waterlogged is what lets the spores swim to citrus roots.

Runoff and irrigation water can carry Phytophthora propagules downslope, so citrus planted below an infected tree faces increased risk of gummosis, though the order in which nearby trees develop symptoms varies.

Infested soil also travels on boots, spade blades and wheelbarrow wheels, so always work your healthy citrus first and the suspect tree last.

Irrigation water drawn from a pond, ditch or open tank can carry Phytophthora, and delivering it at the root crown is the worst possible combination.

Where citrus foot rot strikes, and what it looks like

The same soil-borne infection shows up on three very different parts of the tree, and each one calls for a different response. Use this table to work out which part of your citrus is talking to you.

Where citrus foot rot strikes, and what it looks like
Part affected What you see What to do
Fruit hanging near the ground Turns brown, drops before ripening, gives off a foul but distinctive smell Pick off and remove sick fruits, plus fallen leaves and branches
Bark at the root crown Rots and exudes gum, splits open, brown wounds form Scrape wounds back to healthy wood, then seal with fungus-killing pruning paste
Foliage Yellows and dries out in stages; remaining leaves sit at strange angles to the branch Spray the leaves as well as watering the soil, without overdoing it
The whole young tree Never really gets going, then dies off abruptly after a few years with no insect damage Plant saplings whose graft joint sits at least 10 inches (25 cm) above the soil

Whichever part shows first, the underlying cause is the same: water sitting where it should not.

Symptoms of citrus root rot

On citrus trees, it’s (sad to say) very easy to identify citrus root rot:

  • Citrus fruits infected by this particular type of mildew turn brown, fall off of the tree before they’re even ripe. They release a foul but very distinctive smell.
  • The bark, at the root crown, rots and exudes a gum
    Symptoms of root or foot rot on citrus: gummosis
    Gum oozes from the root crown, where bark is thinnest

    my sap. It bursts open in places and brown wounds form.

  • Foliage turns yellow, dries out in stages, and leaves that remain on the stems start forming strange angles with the branch.

Usually, it takes years for the tree to slowly wane, and then it suddenly dies. On a young tree, the disease spreads particularly fast.

Preventive treatment

  • Never get the trunk wet. Water with drip irrigation, or use a tool/protection to keep the root crown from getting and staying wet. For instance, a technique called “double ridge” watering will help keep the base of the trunk dry.
  • Disinfect your tools even as you switch trees during your work. Either run them across a hot flame (careful!) or dip them in pure chlorine (and dry or let it evaporate).
  • When you buy young saplings, chose those that have a graft joint at least 10 inches high (25 cm). The rootstock should be tall enough.

Double-ridge watering: citrus trees hate getting water at the base of the trunk (root crown). This is because water often brings on disease. The root crown is a vulnerable spot because the bark is much thinner there. A “double ridge” is a means to protect the trunk from getting touched by water even when there’s a lot of it, like during heavy rains. An inside ridge keep water from reaching the trunk, while an outside ridge channels water to roots all around the tree: it’s set 2-3 feet out beyond the drip line (50-80cm).

Curative treatment

Sick fruit like this browning lemon should be eliminated
Infected fruit browns and drops long before ripening
  • Eliminate sick fruits and any leaves and branches that fall to the ground.
  • Treat apparent wounds (even the smallest ones) by scraping them until you reach healthy wood. Then, cover them with fungus-killing pruning paste, such as that used against canker.
  • Water around the tree with a copper-containing mix, or (if you’re not exclusively organic) Aliette, a common fungicide that also treats against Verticillium and fire blight. If leaves are also hit, spray them, too (but don’t overdo it).
  • Complement this curative treatment with a lather of bordeaux mixture on the trunk.

Good to know

Just like animals (and, of course, us humans), citrus trees can and do fall victim to diseases because of fungus, viruses, or lack of nutrients (vitamins, trace minerals…). Such issues have consequences that are often much more critical than those caused by pests and parasites.

In previous times, even until recently, what is called Phytophthora was thought to be a fungus. Nowadays it’s been classified as an Oomycete. This is a life form that looks like a fungus, but is actually genetically related to algae. Even though this might seem to be a detail, this new understanding is already opening inroads into new forms of treatment. Let’s hope they’re made available soon!


Images: Bugwood.org: Gerald Holmes, CC BY 2.0: JIRCAS Library; dreamstime: Lertwit Sasipreyajun; Public Domain: Scot Nelson

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